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GenBank Identifier | RefSeq Acc. | Name |
9627014 | NC_001514.1 | Woolly monkey sarcoma virus |
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ID | strand | start position | length | sRNA loop score |
core MFE.![]() |
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
3228 | + | 8405 | 85 | 19.5 | -24.7 | 5' arm 3' arm | |||
3235 | - | 3595 | 90 | 22 | -24.64 | NP_041260 | 5' arm 3' arm | ||
3226 | + | 408 | 89 | 23.5 | -23.4 | 5' arm 3' arm | |||
3234 | - | 2835 | 90 | 23 | -23.1 | NP_041259 | 5' arm 3' arm | ||
3231 | - | 1770 | 90 | 22 | -22.67 | NP_041259 | 5' arm 3' arm | ||
3230 | - | 596 | 89 | 19 | -22.6 | 5' arm 3' arm | |||
3233 | - | 2494 | 89 | 19 | -21.8 | NP_041259 | 5' arm 3' arm | ||
3236 | - | 6393 | 90 | 20.5 | -21.4 | NP_041262 | 5' arm 3' arm | ||
3237 | - | 8471 | 90 | 22 | -20.6 | 5' arm 3' arm | |||
3229 | - | 142 | 90 | 22 | -20.6 | 5' arm 3' arm | |||
3232 | - | 2152 | 90 | 19.5 | -20.4 | NP_041259 | 5' arm 3' arm | ||
3227 | + | 6070 | 87 | 19 | -20.1 | NP_041261 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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