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GenBank Identifier | RefSeq Acc. | Name |
9625551 | NC_001339.1 | Artichoke mottled crinkle virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
1527 | + | 484 | 83 | 19.5 | -24.5 | NP_039809 | 5' arm 3' arm | ||
1528 | + | 1072 | 90 | 21 | -27.61 | NP_039808 | 5' arm 3' arm | ||
1529 | + | 1374 | 88 | 22.5 | -22.8 | NP_039808 | 5' arm 3' arm | ||
1530 | + | 2303 | 87 | 22 | -25.7 | NP_039808 | 5' arm 3' arm | ||
1531 | + | 2897 | 88 | 20.5 | -20.1 | NP_039810 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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