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GenBank Identifier | RefSeq Acc. | Name |
39653674 | NC_005294.1 | Bacteriophage EJ-1 provirus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
25008 | + | 9065 | 90 | 20 | -23.3 | NP_945255 | 5' arm 3' arm | ||
25009 | + | 24370 | 85 | 21 | -26 | 5' arm 3' arm | |||
25010 | + | 27180 | 90 | 22.5 | -25.8 | NP_945288 | 5' arm 3' arm | ||
25011 | + | 30559 | 89 | 22 | -21.7 | NP_945294 | 5' arm 3' arm | ||
25012 | + | 39838 | 90 | 23 | -27.9 | NP_945308 | 5' arm 3' arm | ||
25013 | + | 41655 | 89 | 20.5 | -21.7 | NP_945312 | 5' arm 3' arm | ||
25014 | - | 4943 | 89 | 23 | -21.9 | NP_945245 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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