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GenBank Identifier | RefSeq Acc. | Name |
51527264 | NC_003266.2 | Human adenovirus E |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
11843 | + | 595 | 72 | 21 | -19.4 | YP_068018 | 5' arm 3' arm | ||
11844 | + | 2929 | 90 | 22 | -29.3 | YP_068020 | 5' arm 3' arm | ||
11845 | + | 3429 | 90 | 21 | -22.3 | YP_068021 | 5' arm 3' arm | ||
11846 | + | 3746 | 80 | 19 | -25.6 | YP_068021 | 5' arm 3' arm | ||
11847 | + | 4553 | 89 | 20.5 | -24.2 | YP_068022 | 5' arm 3' arm | ||
11848 | + | 5023 | 90 | 20 | -21.6 | YP_068022 | 5' arm 3' arm | ||
11849 | + | 5618 | 87 | 19.5 | -27.9 | YP_068023 | 5' arm 3' arm | ||
11850 | + | 6085 | 90 | 24 | -26.1 | YP_068023 | 5' arm 3' arm | ||
11851 | + | 6250 | 86 | 19.5 | -26.4 | YP_068023 | 5' arm 3' arm | ||
11852 | + | 6654 | 90 | 20 | -28.1 | YP_068023 | 5' arm 3' arm | ||
11853 | + | 7084 | 85 | 21 | -21.8 | YP_068023 | 5' arm 3' arm | ||
11854 | + | 8466 | 90 | 20 | -23.2 | YP_068024 | 5' arm 3' arm | ||
11855 | + | 9386 | 89 | 19.5 | -20.1 | YP_068024 | 5' arm 3' arm | ||
11856 | + | 9639 | 90 | 19.5 | -25.6 | YP_068024 | 5' arm 3' arm | ||
11857 | + | 10095 | 87 | 20.5 | -28.6 | YP_068024 | 5' arm 3' arm | ||
11858 | + | 13325 | 90 | 22.5 | -20.9 | YP_068026 | 5' arm 3' arm | ||
11859 | + | 13654 | 81 | 20.5 | -23.3 | YP_068026 | 5' arm 3' arm | ||
11860 | + | 13791 | 90 | 23 | -19.4 | YP_068027 | 5' arm 3' arm | ||
11861 | + | 16247 | 85 | 20 | -24.8 | YP_068029 | 5' arm 3' arm | ||
11862 | + | 21060 | 82 | 19.5 | -24 | YP_068033 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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