miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
2500	+	3396	89	21	-23.8	NP_040851		5' arm      3' arm
2501	+	7459	87	20.5	-21.4	NP_040853		5' arm      3' arm
2502	+	7746	88	19	-25.2	NP_040853		5' arm      3' arm
2503	+	8766	84	21.5	-19.7	NP_040854		5' arm      3' arm
2504	+	9478	90	19	-26.1	NP_040854		5' arm      3' arm
2505	+	10329	85	19	-36.5	NP_040855		5' arm      3' arm
2506	+	10583	89	19.5	-21.5	NP_040855		5' arm      3' arm
2507	+	10716	90	23	-27	NP_040855		5' arm      3' arm
2508	+	11393	88	21.5	-20.4	NP_040856		5' arm      3' arm
2509	+	12598	89	20.5	-19.8	NP_040856		5' arm      3' arm
2510	+	15161	87	20.5	-25.5	NP_040858		5' arm      3' arm
2511	+	16011	89	19	-32.9	NP_040859		5' arm      3' arm
2512	+	20518	90	21.5	-23	NP_040863		5' arm      3' arm
2513	+	25490	89	19	-20.4	NP_040868		5' arm      3' arm
2514	+	26095	90	22.5	-24.5			5' arm      3' arm
2515	-	11597	90	21	-28.9	NP_040856		5' arm      3' arm
2516	-	12625	82	20	-21.3	NP_040856		5' arm      3' arm
2517	-	12850	89	21	-26.2	NP_040856		5' arm      3' arm
2518	-	13076	90	21	-19.9	NP_040856		5' arm      3' arm
2519	-	14655	90	23	-23.8	NP_040857		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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