miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8358	-	11245	89	22.5	-19.4	NP_049377		5' arm      3' arm
8385	-	33323	85	19.5	-20.1	NP_597881		5' arm      3' arm
8329	+	8850	89	20	-20.1	NP_049376		5' arm      3' arm
8353	-	7927	90	20	-21	NP_049375		5' arm      3' arm
8364	-	14968	87	22	-21	NP_049379		5' arm      3' arm
8332	+	11922	85	20.5	-21.06	NP_049378		5' arm      3' arm
8320	+	4024	86	22	-21.3	NP_597866		5' arm      3' arm
8348	+	31054	81	20	-21.4	NP_049382		5' arm      3' arm
8323	+	4646	82	20.5	-21.6	NP_597866		5' arm      3' arm
8328	+	8228	89	23	-21.6			5' arm      3' arm
8361	-	12261	90	22.5	-21.6	NP_049378		5' arm      3' arm
8373	-	20179	89	20.5	-21.84	NP_597869		5' arm      3' arm
8322	+	4513	86	19	-21.9			5' arm      3' arm
8357	-	11009	90	21	-22	NP_049377		5' arm      3' arm
8349	-	1302	87	23.5	-22.1			5' arm      3' arm
8344	+	23390	90	21	-22.2	NP_597871		5' arm      3' arm
8318	+	1917	89	21.5	-22.2	NP_597864		5' arm      3' arm
8336	+	16010	90	19.5	-22.3	NP_597867		5' arm      3' arm
8369	-	16819	89	20.5	-22.4	NP_597868		5' arm      3' arm
8321	+	4321	88	23.5	-22.5	NP_597866		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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