miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8378	-	24973	90	21.5	-25.9	NP_597871		5' arm      3' arm
8368	-	16708	81	19	-25.9	NP_597867		5' arm      3' arm
8382	-	30607	90	20	-25.8	NP_597878		5' arm      3' arm
8362	-	12526	88	20	-25.3	NP_049378		5' arm      3' arm
8333	+	13090	89	24	-25.2	NP_049378		5' arm      3' arm
8339	+	20716	89	19.5	-25.1	NP_049381		5' arm      3' arm
8356	-	10866	88	21	-25	NP_049377		5' arm      3' arm
8366	-	15762	90	19	-25			5' arm      3' arm
8360	-	11994	88	20	-24.7	NP_049378		5' arm      3' arm
8334	+	13545	88	19.5	-24.6	NP_049379		5' arm      3' arm
8372	-	19569	86	19	-24.6	NP_597869		5' arm      3' arm
8381	-	25751	87	20.5	-24.2	NP_597872		5' arm      3' arm
8347	+	29510	88	20	-24	NP_597876		5' arm      3' arm
8379	-	25462	90	20.5	-23.5			5' arm      3' arm
8335	+	14209	89	19.5	-23.4	NP_049379		5' arm      3' arm
8354	-	10382	87	20	-23.3			5' arm      3' arm
8324	+	5074	90	22	-23.2	NP_597866		5' arm      3' arm
8363	-	12976	90	21.5	-23.2	NP_049378		5' arm      3' arm
8352	-	4875	90	19.5	-23.2	NP_597866		5' arm      3' arm
8340	+	21341	87	22.5	-23.1	NP_597870		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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