miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8358	-	11245	89	22.5	-19.4	NP_049377		5' arm      3' arm
8359	-	11877	90	21	-27.9	NP_049378		5' arm      3' arm
8360	-	11994	88	20	-24.7	NP_049378		5' arm      3' arm
8361	-	12261	90	22.5	-21.6	NP_049378		5' arm      3' arm
8362	-	12526	88	20	-25.3	NP_049378		5' arm      3' arm
8363	-	12976	90	21.5	-23.2	NP_049378		5' arm      3' arm
8364	-	14968	87	22	-21	NP_049379		5' arm      3' arm
8365	-	15600	89	23	-28.9			5' arm      3' arm
8366	-	15762	90	19	-25			5' arm      3' arm
8367	-	16173	89	22	-27.1	NP_597867		5' arm      3' arm
8368	-	16708	81	19	-25.9	NP_597867		5' arm      3' arm
8369	-	16819	89	20.5	-22.4	NP_597868		5' arm      3' arm
8370	-	17595	81	21	-23.1	NP_049380		5' arm      3' arm
8371	-	17698	88	21.5	-29.7	NP_049380		5' arm      3' arm
8372	-	19569	86	19	-24.6	NP_597869		5' arm      3' arm
8373	-	20179	89	20.5	-21.84	NP_597869		5' arm      3' arm
8374	-	20475	90	19	-27.8	NP_597869		5' arm      3' arm
8375	-	20779	90	19	-22.7	NP_049381		5' arm      3' arm
8376	-	20956	90	19.5	-30.3	NP_049381		5' arm      3' arm
8377	-	21096	87	22	-26.6	NP_049381		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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