miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8345	+	24453	87	24	-34.1	NP_597871		5' arm      3' arm
8344	+	23390	90	21	-22.2	NP_597871		5' arm      3' arm
8343	+	22944	88	19	-31	NP_597871		5' arm      3' arm
8342	+	22591	89	20	-34.1	NP_597870		5' arm      3' arm
8341	+	22054	88	21	-22.7	NP_597870		5' arm      3' arm
8340	+	21341	87	22.5	-23.1	NP_597870		5' arm      3' arm
8339	+	20716	89	19.5	-25.1	NP_049381		5' arm      3' arm
8338	+	17413	90	21	-27	NP_049380		5' arm      3' arm
8337	+	17324	88	21.5	-29.5	NP_049380		5' arm      3' arm
8336	+	16010	90	19.5	-22.3	NP_597867		5' arm      3' arm
8335	+	14209	89	19.5	-23.4	NP_049379		5' arm      3' arm
8334	+	13545	88	19.5	-24.6	NP_049379		5' arm      3' arm
8333	+	13090	89	24	-25.2	NP_049378		5' arm      3' arm
8332	+	11922	85	20.5	-21.06	NP_049378		5' arm      3' arm
8331	+	10920	90	21	-27.3	NP_049377		5' arm      3' arm
8330	+	10258	90	19	-22.6			5' arm      3' arm
8329	+	8850	89	20	-20.1	NP_049376		5' arm      3' arm
8328	+	8228	89	23	-21.6			5' arm      3' arm
8327	+	6970	90	19	-22.7	NP_049375		5' arm      3' arm
8326	+	6013	90	21.5	-23.1	NP_049375		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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