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GenBank Identifier | RefSeq Acc. | Name |
9629466 | NC_001813.1 | Duck adenovirus A |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
6032 | + | 268 | 90 | 21.5 | -32 | NP_044698 | 5' arm 3' arm | ||
6033 | + | 768 | 90 | 28 | -23.3 | NP_044698 | 5' arm 3' arm | ||
6034 | + | 1016 | 88 | 24.5 | -21.3 | NP_044698 | 5' arm 3' arm | ||
6035 | + | 4087 | 90 | 21 | -25.2 | NP_044702 | 5' arm 3' arm | ||
6036 | + | 7148 | 89 | 21.5 | -21.9 | NP_044702 | 5' arm 3' arm | ||
6037 | + | 8342 | 77 | 20 | -20.4 | NP_044703 | 5' arm 3' arm | ||
6038 | + | 11263 | 88 | 21 | -23.1 | NP_044705 | 5' arm 3' arm | ||
6039 | + | 13791 | 89 | 21.5 | -22.5 | NP_044708 | 5' arm 3' arm | ||
6040 | + | 14010 | 82 | 20 | -20.8 | NP_044709 | 5' arm 3' arm | ||
6041 | + | 16339 | 87 | 23.5 | -29.6 | NP_044710 | 5' arm 3' arm | ||
6042 | + | 19303 | 90 | 23 | -22.9 | NP_044713 | 5' arm 3' arm | ||
6043 | + | 26757 | 85 | 23 | -20.1 | 5' arm 3' arm | |||
6044 | + | 28322 | 84 | 21.5 | -23.8 | NP_044720 | 5' arm 3' arm | ||
6045 | + | 28537 | 90 | 21.5 | -27.4 | NP_044720 | 5' arm 3' arm | ||
6046 | + | 30221 | 89 | 20 | -21.4 | NP_044723 | 5' arm 3' arm | ||
6047 | - | 14446 | 88 | 22.5 | -22.7 | NP_044709 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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