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| GenBank Identifier | RefSeq Acc. | Name |
| 46852402 | NC_005869.1 | Porcine adenovirus A |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 27413 | + | 5636 | 89 | 24.5 | -24.1 | YP_009201 | 5' arm 3' arm | ||
| 27418 | + | 8101 | 90 | 23 | -29 | YP_009201 | 5' arm 3' arm | ||
| 27422 | + | 9630 | 90 | 20 | -22 | YP_009202 | 5' arm 3' arm | ||
| 27421 | + | 9513 | 89 | 20.5 | -19.9 | YP_009202 | 5' arm 3' arm | ||
| 27420 | + | 9322 | 90 | 21.5 | -26.4 | YP_009202 | 5' arm 3' arm | ||
| 27423 | + | 11247 | 89 | 20 | -19.8 | YP_009203 | 5' arm 3' arm | ||
| 27444 | - | 10834 | 90 | 19 | -22.6 | YP_009203 | 5' arm 3' arm | ||
| 27424 | + | 11337 | 86 | 19 | -24.3 | YP_009203 | 5' arm 3' arm | ||
| 27447 | - | 13061 | 90 | 22 | -22.7 | YP_009204 | 5' arm 3' arm | ||
| 27426 | + | 12972 | 89 | 23 | -22.2 | YP_009204 | 5' arm 3' arm | ||
| 27425 | + | 12010 | 89 | 21.5 | -30 | YP_009204 | 5' arm 3' arm | ||
| 27446 | - | 12807 | 89 | 21 | -25.2 | YP_009204 | 5' arm 3' arm | ||
| 27445 | - | 12420 | 88 | 20 | -32.1 | YP_009204 | 5' arm 3' arm | ||
| 27448 | - | 13522 | 89 | 21 | -26.7 | YP_009204 | 5' arm 3' arm | ||
| 27451 | - | 14784 | 82 | 21 | -29.8 | YP_009205 | 5' arm 3' arm | ||
| 27427 | + | 13643 | 89 | 21 | -27.6 | YP_009205 | 5' arm 3' arm | ||
| 27449 | - | 14180 | 89 | 20 | -22.5 | YP_009205 | 5' arm 3' arm | ||
| 27428 | + | 14129 | 90 | 19.5 | -19.8 | YP_009205 | 5' arm 3' arm | ||
| 27450 | - | 14632 | 89 | 22.5 | -25 | YP_009205 | 5' arm 3' arm | ||
| 27453 | - | 15352 | 89 | 22 | -28.7 | YP_009206 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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