miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
10642	+	21029	90	21	-31.6	NP_108669		5' arm      3' arm
10625	+	58	90	20	-31.4			5' arm      3' arm
10654	-	21580	90	22.5	-30.1	NP_108670		5' arm      3' arm
10649	-	13875	90	20	-28	NP_108663		5' arm      3' arm
10650	-	14520	74	21.5	-26.9	NP_108664		5' arm      3' arm
10655	-	22847	87	20	-26.8	NP_108670		5' arm      3' arm
10660	-	32537	89	21	-26.7			5' arm      3' arm
10626	+	3544	85	23	-26.1	NP_108657		5' arm      3' arm
10627	+	7452	90	22.5	-26.1			5' arm      3' arm
10659	-	32101	87	23.5	-25.8			5' arm      3' arm
10647	-	10761	88	21.5	-24.8	NP_108661		5' arm      3' arm
10638	+	15510	89	20.5	-24.7	NP_108665		5' arm      3' arm
10651	-	15251	90	21.5	-24.7	NP_108664		5' arm      3' arm
10646	-	8486	89	19	-24.6	NP_108659		5' arm      3' arm
10653	-	18240	85	22	-24.5	NP_108667		5' arm      3' arm
10648	-	13574	88	20	-24.5	NP_108662		5' arm      3' arm
10636	+	13159	86	21	-24.4	NP_108662		5' arm      3' arm
10657	-	23914	89	21	-24.4	NP_108672		5' arm      3' arm
10639	+	15963	82	19	-24.4	NP_108666		5' arm      3' arm
10658	-	24056	85	21.5	-24.4	NP_108672		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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