miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11318	+	21596	87	21	-20.8	NP_203330		5' arm      3' arm
11317	+	17507	72	19	-27.6	NP_203326		5' arm      3' arm
11316	+	14551	90	19.5	-23.2	NP_203321		5' arm      3' arm
11313	+	6875	85	20.5	-24.1	NP_203309		5' arm      3' arm
11315	+	7826	89	23	-22.6	NP_203310		5' arm      3' arm
11325	+	37852	89	19.5	-29.41			5' arm      3' arm
11326	+	39653	85	19.5	-28.3	NP_203351		5' arm      3' arm
11342	+	67656	87	21	-27.61	NP_203380		5' arm      3' arm
11340	+	63068	90	19	-25.9	NP_203376		5' arm      3' arm
11339	+	54692	88	20.5	-25.2	NP_203370		5' arm      3' arm
11338	+	53007	86	21	-25.3			5' arm      3' arm
11334	+	49107	90	20	-21.5			5' arm      3' arm
11333	+	47246	90	20.5	-20.7	NP_203363		5' arm      3' arm
11337	+	49582	89	22	-23.7			5' arm      3' arm
11336	+	49369	89	25.5	-32.9			5' arm      3' arm
11335	+	49199	89	28.5	-35.6			5' arm      3' arm
11332	+	44042	90	19	-26.7			5' arm      3' arm
11331	+	43939	89	20.5	-33.4	NP_203360		5' arm      3' arm
11330	+	42125	89	21.5	-24.1	NP_203357		5' arm      3' arm
11329	+	41683	90	22.5	-19.4	NP_203357		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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