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| GenBank Identifier | RefSeq Acc. | Name |
| 41179217 | NC_005355.1 | Lactobacillus johnsonii prophage Lj965 provirus |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 26437 | + | 20571 | 86 | 21.5 | -26 | 5' arm 3' arm | |||
| 26438 | + | 26487 | 90 | 19.5 | -22.8 | NP_958593 | 5' arm 3' arm | ||
| 26439 | + | 39354 | 89 | 22.5 | -29.4 | 5' arm 3' arm | |||
| 26440 | - | 32683 | 89 | 23 | -22 | NP_958595 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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