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GenBank Identifier | RefSeq Acc. | Name |
27881469 | NC_004541.1 | Walrus calicivirus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
17674 | + | 87 | 88 | 20.5 | -37.1 | NP_777370 | 5' arm 3' arm | ||
17675 | + | 2954 | 88 | 20.5 | -30.4 | NP_777370 | 5' arm 3' arm | ||
17676 | + | 3873 | 90 | 27 | -24.3 | NP_777370 | 5' arm 3' arm | ||
17677 | + | 6035 | 88 | 21 | -21.7 | NP_777371 | 5' arm 3' arm | ||
17678 | - | 194 | 88 | 21.5 | -27.4 | NP_777370 | 5' arm 3' arm | ||
17679 | - | 1409 | 88 | 24.5 | -31.9 | NP_777370 | 5' arm 3' arm | ||
17680 | - | 1820 | 90 | 23 | -29.4 | NP_777370 | 5' arm 3' arm | ||
17681 | - | 4055 | 78 | 19 | -31.1 | NP_777370 | 5' arm 3' arm | ||
17682 | - | 4338 | 89 | 23.5 | -21.9 | NP_777370 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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