miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13063	-	12475	90	21	-21.8	NP_570328		5' arm      3' arm
13054	-	3976	87	21	-23.1	NP_570316		5' arm      3' arm
13065	-	20259	90	21	-21.5	NP_570339		5' arm      3' arm
13082	-	44187	89	19.5	-25.4	NP_570384		5' arm      3' arm
13058	-	7460	87	20	-25.82			5' arm      3' arm
13060	-	9595	88	20.5	-27.6	NP_570322		5' arm      3' arm
13053	-	3561	89	20	-24.5	NP_570316		5' arm      3' arm
13051	-	1141	84	21.5	-27	NP_570313		5' arm      3' arm
13080	-	43560	87	21.5	-22.8	NP_570383		5' arm      3' arm
13081	-	44089	87	22	-21.4	NP_570384		5' arm      3' arm
13078	-	41365	87	19.5	-22.9	NP_570375		5' arm      3' arm
13077	-	38064	87	20	-22.7	NP_570367		5' arm      3' arm
13079	-	42641	88	20	-36	NP_570379		5' arm      3' arm
13017	+	7372	89	22.5	-22.1			5' arm      3' arm
13034	+	28086	90	19.5	-20	NP_570351		5' arm      3' arm
13038	+	29533	90	21	-21.5	NP_570352		5' arm      3' arm
13035	+	28363	87	23	-21.06	NP_570351		5' arm      3' arm
13037	+	29437	90	25.5	-24.7	NP_570352		5' arm      3' arm
13021	+	9866	90	24	-22.7	NP_570322		5' arm      3' arm
13022	+	10188	89	20	-22.7	NP_570322		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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