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GenBank Identifier | RefSeq Acc. | Name |
27311166 | NC_004455.1 | Simian immunodeficiency virus 2 |
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ID | strand | start position | length | sRNA loop score |
core MFE.![]() |
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
17467 | - | 5871 | 88 | 20.5 | -29.6 | 5' arm 3' arm | |||
17463 | + | 1266 | 87 | 20.5 | -27.8 | NP_758886 | 5' arm 3' arm | ||
17465 | + | 8771 | 90 | 20 | -26.7 | NP_758893 | 5' arm 3' arm | ||
17466 | - | 1450 | 90 | 19 | -22.7 | NP_758886 | 5' arm 3' arm | ||
17464 | + | 3047 | 86 | 21 | -20.3 | NP_758887 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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