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| GenBank Identifier | RefSeq Acc. | Name |
| 18034800 | NC_003157.4 | Temperate phage PhiNIH1.1 |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 11722 | + | 6985 | 89 | 21.5 | -21 | NP_438123 | 5' arm 3' arm | ||
| 11723 | + | 12058 | 85 | 20.5 | -20 | 5' arm 3' arm | |||
| 11724 | + | 31475 | 89 | 21 | -24.5 | NP_438156 | 5' arm 3' arm | ||
| 11725 | + | 31658 | 81 | 22 | -25.6 | NP_438157 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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