miRNA display CGI


Results 21 - 40 of 46 are showing below:
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GenBank Identifier RefSeq Acc. Name
23505445 NC_004313.1 Salmonella typhimurium phage ST64B

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
16922 + 11829 89 19 -21 NP_700389 5' arm      3' arm
16919 + 10508 88 21.5 -30.9 NP_700389 5' arm      3' arm
16946 - 11777 90 22.5 -28 NP_700389 5' arm      3' arm
16947 - 12829 86 22.5 -21.8 NP_700390 5' arm      3' arm
16950 - 14277 89 20 -24.5 NP_700391 5' arm      3' arm
16948 - 13578 79 19 -20.2 NP_700391 5' arm      3' arm
16949 - 14073 89 22 -28.8 NP_700391 5' arm      3' arm
16923 + 14496 90 21.5 -19.7 NP_700392 5' arm      3' arm
16924 + 16136 90 19 -20.2 NP_700395 5' arm      3' arm
16925 + 17353 86 21 -22.1 NP_700397 5' arm      3' arm
16951 - 24281 84 19.5 -23 NP_700405 5' arm      3' arm
16926 + 24424 90 22.5 -20 NP_700405 5' arm      3' arm
16952 - 24659 90 22 -23.4 NP_700406 5' arm      3' arm
16927 + 26381 83 22.5 -19.5 NP_700409 5' arm      3' arm
16930 + 29542 90 19.5 -20.6 NP_700413 5' arm      3' arm
16931 + 29966 85 19 -21.4 NP_700414 5' arm      3' arm
16932 + 31300 85 20.5 -24.2 NP_700415 5' arm      3' arm
16953 - 31171 90 19 -21.8 NP_700415 5' arm      3' arm
16933 + 32495 88 22 -22.6 NP_700417 5' arm      3' arm
16934 + 33276 86 20.5 -25.1 NP_700418 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.