miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12200	-	4668	86	19.5	-21.4	NP_536361		5' arm      3' arm
12223	-	15549	89	20.5	-21.4	NP_536374		5' arm      3' arm
12159	+	36394	88	19	-21.4	NP_536399		5' arm      3' arm
12260	-	44480	89	19.5	-21.4	NP_536413		5' arm      3' arm
12148	+	27951	90	21	-21.5	NP_536388		5' arm      3' arm
12126	+	16478	81	19.5	-21.5	NP_536375		5' arm      3' arm
12120	+	12808	89	25	-21.6	NP_536371		5' arm      3' arm
12199	-	4438	90	20	-21.7	NP_536361		5' arm      3' arm
12193	-	1776	88	20.5	-21.8	NP_536358		5' arm      3' arm
12242	-	28962	89	19	-21.8			5' arm      3' arm
12243	-	31235	89	20	-21.8	NP_536393		5' arm      3' arm
12166	+	39412	89	21	-21.9	NP_536404		5' arm      3' arm
12158	+	35623	89	20	-21.9	NP_536398		5' arm      3' arm
12191	+	53098	89	19	-21.9	NP_536427		5' arm      3' arm
12245	-	33327	82	19.5	-21.9			5' arm      3' arm
12262	-	45591	90	21	-21.9	NP_536414		5' arm      3' arm
12169	+	41450	88	21	-21.9	NP_536409		5' arm      3' arm
12168	+	41001	89	20	-22			5' arm      3' arm
12164	+	38926	88	19	-22.1	NP_536403		5' arm      3' arm
12241	-	28816	83	19.5	-22.1	NP_536389		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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