miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12241	-	28816	83	19.5	-22.1	NP_536389		5' arm      3' arm
12257	-	43407	88	21.5	-27.2	NP_536412		5' arm      3' arm
12268	-	50295	90	20	-27.51	NP_536423		5' arm      3' arm
12238	-	26358	90	20	-32.3	NP_536387		5' arm
12269	-	50606	90	20	-19.4	NP_536424		5' arm
12212	-	10612	89	22.5	-27.62	NP_536371		5' arm      3' arm
12271	-	52438	89	19.5	-20.1	NP_536425		5' arm      3' arm
12222	-	15432	88	19	-27.1	NP_536374		5' arm      3' arm
12223	-	15549	89	20.5	-21.4	NP_536374		5' arm      3' arm
12228	-	20022	88	22	-22.7	NP_536377		5' arm      3' arm
12237	-	25585	90	19	-22.2	NP_536386		5' arm      3' arm
12232	-	22847	85	20.5	-31.1			5' arm      3' arm
12240	-	28259	88	19	-21.36	NP_536389		3' arm
12245	-	33327	82	19.5	-21.9			5' arm      3' arm
12244	-	31733	89	20	-23.4	NP_536393		5' arm      3' arm
12249	-	35562	81	22	-29.6	NP_536398		5' arm      3' arm
12256	-	41763	87	20.5	-24.2			5' arm      3' arm
12261	-	44670	89	19.5	-20.5	NP_536414		5' arm      3' arm
12262	-	45591	90	21	-21.9	NP_536414		5' arm      3' arm
12265	-	48008	90	25	-24.8			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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