miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12270	-	51546	85	19	-22.2	NP_536424		5' arm      3' arm
12236	-	25366	89	20	-24.9	NP_536385		5' arm      3' arm
12216	-	11819	89	22	-25.8	NP_536371		5' arm      3' arm
12221	-	13544	87	19	-23.1	NP_536372		5' arm      3' arm
12234	-	24582	90	22	-19.6	NP_536384		5' arm      3' arm
12260	-	44480	89	19.5	-21.4	NP_536413		5' arm      3' arm
12273	-	53160	88	19	-23	NP_536427		5' arm      3' arm
12271	-	52438	89	19.5	-20.1	NP_536425		5' arm      3' arm
12251	-	37334	84	22.5	-31.5	NP_536400		3' arm
12246	-	33546	90	19	-20.3	NP_536395		5' arm
12248	-	34518	90	19.5	-23	NP_536396		5' arm      3' arm
12256	-	41763	87	20.5	-24.2			5' arm      3' arm
12263	-	47029	89	21.5	-22.5	NP_536417		5' arm      3' arm
12224	-	18407	87	21.5	-24.5	NP_536377		5' arm      3' arm
12225	-	19059	88	23.5	-19.8	NP_536377		5' arm      3' arm
12240	-	28259	88	19	-21.36	NP_536389		3' arm
12220	-	13064	87	20	-24.9	NP_536371		5' arm      3' arm
12195	-	2231	90	19.5	-22.4	NP_536358		5' arm      3' arm
12217	-	11931	86	21.5	-21	NP_536371		5' arm      3' arm
12223	-	15549	89	20.5	-21.4	NP_536374		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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