miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12272	-	52588	89	21.5	-31.5	NP_536425		5' arm      3' arm
12246	-	33546	90	19	-20.3	NP_536395		5' arm
12245	-	33327	82	19.5	-21.9			5' arm      3' arm
12254	-	40080	89	19.5	-19.82	NP_536406		5' arm      3' arm
12264	-	47387	87	20	-23.1	NP_536417		5' arm      3' arm
12231	-	22365	90	23	-29.5	NP_536382		5' arm      3' arm
12238	-	26358	90	20	-32.3	NP_536387		5' arm
12259	-	44307	86	22	-21	NP_536413		5' arm      3' arm
12250	-	36575	84	19	-27.2	NP_536399		3' arm
12249	-	35562	81	22	-29.6	NP_536398		5' arm      3' arm
12270	-	51546	85	19	-22.2	NP_536424		5' arm      3' arm
12273	-	53160	88	19	-23	NP_536427		5' arm      3' arm
12236	-	25366	89	20	-24.9	NP_536385		5' arm      3' arm
12234	-	24582	90	22	-19.6	NP_536384		5' arm      3' arm
12248	-	34518	90	19.5	-23	NP_536396		5' arm      3' arm
12260	-	44480	89	19.5	-21.4	NP_536413		5' arm      3' arm
12258	-	44201	90	20	-22.3	NP_536413		5' arm      3' arm
12271	-	52438	89	19.5	-20.1	NP_536425		5' arm      3' arm
12251	-	37334	84	22.5	-31.5	NP_536400		3' arm
12247	-	33822	90	24.5	-32.3	NP_536395		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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