miRNA display CGI


Results 21 - 40 of 179 are showing below:
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GenBank Identifier RefSeq Acc. Name
17975161 NC_003309.1 Bacteriophage phiE125

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
12242 - 28962 89 19 -21.8 5' arm      3' arm
12250 - 36575 84 19 -27.2 NP_536399       3' arm
12183 + 47541 87 19 -25.6 NP_536417 5' arm      3' arm
12171 + 42115 83 19 -29.8 NP_536410 5' arm      3' arm
12221 - 13544 87 19 -23.1 NP_536372 5' arm      3' arm
12180 + 46461 89 19 -24.1 NP_536416 5' arm      3' arm
12246 - 33546 90 19 -20.3 NP_536395 5' arm      
12206 - 5775 90 19 -20 NP_536362 5' arm      3' arm
12195 - 2231 90 19.5 -22.4 NP_536358 5' arm      3' arm
12097 + 901 86 19.5 -21.3 NP_536358 5' arm      3' arm
12260 - 44480 89 19.5 -21.4 NP_536413 5' arm      3' arm
12152 + 32653 85 19.5 -22.2 NP_536394 5' arm      3' arm
12161 + 37249 88 19.5 -28.6 NP_536400 5' arm      3' arm
12132 + 18590 90 19.5 -24.8 NP_536377 5' arm      3' arm
12138 + 21890 90 19.5 -27.2 NP_536381 5' arm      3' arm
12099 + 2540 88 19.5 -24.47 NP_536360 5' arm      3' arm
12143 + 25556 90 19.5 -20.3 NP_536386 5' arm      3' arm
12241 - 28816 83 19.5 -22.1 NP_536389 5' arm      3' arm
12245 - 33327 82 19.5 -21.9 5' arm      3' arm
12173 + 43292 85 19.5 -21.2 NP_536412 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.