miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12124	+	14827	88	19	-20.1	NP_536373		5' arm      3' arm
12180	+	46461	89	19	-24.1	NP_536416		5' arm      3' arm
12164	+	38926	88	19	-22.1	NP_536403		5' arm      3' arm
12250	-	36575	84	19	-27.2	NP_536399		3' arm
12270	-	51546	85	19	-22.2	NP_536424		5' arm      3' arm
12191	+	53098	89	19	-21.9	NP_536427		5' arm      3' arm
12188	+	52024	88	19	-26.6			5' arm      3' arm
12103	+	5053	90	19	-29.7	NP_536362		5' arm      3' arm
12108	+	7308	87	19	-24.7	NP_536366		5' arm      3' arm
12159	+	36394	88	19	-21.4	NP_536399		5' arm      3' arm
12246	-	33546	90	19	-20.3	NP_536395		5' arm
12119	+	12688	90	19	-21.3	NP_536371		5' arm      3' arm
12171	+	42115	83	19	-29.8	NP_536410		5' arm      3' arm
12187	+	49862	89	19	-25.8	NP_536423		5' arm      3' arm
12273	-	53160	88	19	-23	NP_536427		5' arm      3' arm
12252	-	37446	86	19	-26.5	NP_536400		5' arm      3' arm
12100	+	2833	90	19	-19.8	NP_536360		5' arm      3' arm
12102	+	4083	81	19	-19.62	NP_536361		5' arm      3' arm
12183	+	47541	87	19	-25.6	NP_536417		5' arm      3' arm
12112	+	8100	89	19	-25.3	NP_536368		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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