Results 1 - 20 of 179 are showing below:
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GenBank Identifier | RefSeq Acc. | Name |
17975161 | NC_003309.1 | Bacteriophage phiE125 |
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ID | strand | start position | length | sRNA loop score |
core MFE.![]() |
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
12139 | + | 23660 | 88 | 25 | -34.9 | 5' arm 3' arm | |||
12266 | - | 48268 | 85 | 21 | -34.8 | NP_536418 | 5' arm 3' arm | ||
12160 | + | 36490 | 88 | 26 | -33.1 | NP_536399 | 5' arm 3' arm | ||
12203 | - | 5389 | 88 | 20.5 | -32.8 | NP_536362 | 5' arm 3' arm | ||
12238 | - | 26358 | 90 | 20 | -32.3 | NP_536387 | 5' arm | ||
12247 | - | 33822 | 90 | 24.5 | -32.3 | NP_536395 | 5' arm 3' arm | ||
12174 | + | 43836 | 85 | 20.5 | -31.8 | NP_536413 | 5' arm 3' arm | ||
12251 | - | 37334 | 84 | 22.5 | -31.5 | NP_536400 | 3' arm | ||
12272 | - | 52588 | 89 | 21.5 | -31.5 | NP_536425 | 5' arm 3' arm | ||
12232 | - | 22847 | 85 | 20.5 | -31.1 | 5' arm 3' arm | |||
12136 | + | 20537 | 88 | 20 | -29.8 | NP_536378 | 5' arm 3' arm | ||
12171 | + | 42115 | 83 | 19 | -29.8 | NP_536410 | 5' arm 3' arm | ||
12115 | + | 9063 | 85 | 23.5 | -29.7 | NP_536370 | 5' arm 3' arm | ||
12103 | + | 5053 | 90 | 19 | -29.7 | NP_536362 | 5' arm 3' arm | ||
12118 | + | 11191 | 85 | 23 | -29.6 | NP_536371 | 5' arm 3' arm | ||
12249 | - | 35562 | 81 | 22 | -29.6 | NP_536398 | 5' arm 3' arm | ||
12231 | - | 22365 | 90 | 23 | -29.5 | NP_536382 | 5' arm 3' arm | ||
12114 | + | 8779 | 90 | 22 | -29.3 | NP_536369 | 5' arm 3' arm | ||
12161 | + | 37249 | 88 | 19.5 | -28.6 | NP_536400 | 5' arm 3' arm | ||
12176 | + | 44380 | 85 | 20.5 | -28.1 | NP_536413 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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