miRNA display CGI


Results 1 - 20 of 179 are showing below:
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GenBank Identifier RefSeq Acc. Name
17975161 NC_003309.1 Bacteriophage phiE125

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
12139 + 23660 88 25 -34.9 5' arm      3' arm
12266 - 48268 85 21 -34.8 NP_536418 5' arm      3' arm
12160 + 36490 88 26 -33.1 NP_536399 5' arm      3' arm
12203 - 5389 88 20.5 -32.8 NP_536362 5' arm      3' arm
12238 - 26358 90 20 -32.3 NP_536387 5' arm      
12247 - 33822 90 24.5 -32.3 NP_536395 5' arm      3' arm
12174 + 43836 85 20.5 -31.8 NP_536413 5' arm      3' arm
12251 - 37334 84 22.5 -31.5 NP_536400       3' arm
12272 - 52588 89 21.5 -31.5 NP_536425 5' arm      3' arm
12232 - 22847 85 20.5 -31.1 5' arm      3' arm
12136 + 20537 88 20 -29.8 NP_536378 5' arm      3' arm
12171 + 42115 83 19 -29.8 NP_536410 5' arm      3' arm
12115 + 9063 85 23.5 -29.7 NP_536370 5' arm      3' arm
12103 + 5053 90 19 -29.7 NP_536362 5' arm      3' arm
12118 + 11191 85 23 -29.6 NP_536371 5' arm      3' arm
12249 - 35562 81 22 -29.6 NP_536398 5' arm      3' arm
12231 - 22365 90 23 -29.5 NP_536382 5' arm      3' arm
12114 + 8779 90 22 -29.3 NP_536369 5' arm      3' arm
12161 + 37249 88 19.5 -28.6 NP_536400 5' arm      3' arm
12176 + 44380 85 20.5 -28.1 NP_536413 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.