miRNA display CGI


Results 1 - 20 of 179 are showing below:
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GenBank Identifier RefSeq Acc. Name
17975161 NC_003309.1 Bacteriophage phiE125

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
12269 - 50606 90 20 -19.4 NP_536424 5' arm      
12208 - 7142 90 20 -19.5 NP_536365 5' arm      3' arm
12234 - 24582 90 22 -19.6 NP_536384 5' arm      3' arm
12185 + 48111 89 22 -19.6 NP_536418 5' arm      3' arm
12102 + 4083 81 19 -19.62 NP_536361 5' arm      3' arm
12165 + 39023 89 26.5 -19.7 NP_536403 5' arm      3' arm
12156 + 34676 90 22 -19.7 5' arm      3' arm
12239 - 27510 89 20 -19.8 NP_536388 5' arm      3' arm
12100 + 2833 90 19 -19.8 NP_536360 5' arm      3' arm
12225 - 19059 88 23.5 -19.8 NP_536377 5' arm      3' arm
12254 - 40080 89 19.5 -19.82 NP_536406 5' arm      3' arm
12146 + 26426 87 20.5 -19.9 NP_536387 5' arm      3' arm
12206 - 5775 90 19 -20 NP_536362 5' arm      3' arm
12271 - 52438 89 19.5 -20.1 NP_536425 5' arm      3' arm
12124 + 14827 88 19 -20.1 NP_536373 5' arm      3' arm
12107 + 6981 88 20.5 -20.2 NP_536365 5' arm      3' arm
12209 - 7837 89 21.5 -20.2 NP_536367 5' arm      3' arm
12143 + 25556 90 19.5 -20.3 NP_536386 5' arm      3' arm
12246 - 33546 90 19 -20.3 NP_536395 5' arm      
12096 + 562 87 20.5 -20.3 NP_536358 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.