miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12113	+	8385	87	23	-23.4	NP_536368		5' arm      3' arm
12144	+	25756	90	22.5	-22.8	NP_536386		5' arm      3' arm
12128	+	17262	79	22.5	-24.5	NP_536377		5' arm      3' arm
12251	-	37334	84	22.5	-31.5	NP_536400		3' arm
12145	+	26285	89	22.5	-23.4	NP_536387		5' arm      3' arm
12212	-	10612	89	22.5	-27.62	NP_536371		5' arm      3' arm
12210	-	9525	89	22.5	-24.8	NP_536371		5' arm      3' arm
12197	-	3512	88	22.5	-23.6	NP_536360		5' arm      3' arm
12196	-	2922	87	22.5	-22.3	NP_536360		5' arm
12147	+	27669	90	22.5	-25.5	NP_536388		5' arm      3' arm
12135	+	19935	88	22	-25.1	NP_536377		5' arm      3' arm
12234	-	24582	90	22	-19.6	NP_536384		5' arm      3' arm
12259	-	44307	86	22	-21	NP_536413		5' arm      3' arm
12157	+	35306	90	22	-22.5	NP_536398		5' arm      3' arm
12156	+	34676	90	22	-19.7			5' arm      3' arm
12253	-	39901	80	22	-22.8			5' arm      3' arm
12228	-	20022	88	22	-22.7	NP_536377		5' arm      3' arm
12141	+	24346	87	22	-26.3	NP_536384		5' arm      3' arm
12114	+	8779	90	22	-29.3	NP_536369		5' arm      3' arm
12185	+	48111	89	22	-19.6	NP_536418		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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