miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12216	-	11819	89	22	-25.8	NP_536371		5' arm      3' arm
12259	-	44307	86	22	-21	NP_536413		5' arm      3' arm
12135	+	19935	88	22	-25.1	NP_536377		5' arm      3' arm
12185	+	48111	89	22	-19.6	NP_536418		5' arm      3' arm
12234	-	24582	90	22	-19.6	NP_536384		5' arm      3' arm
12189	+	52243	90	21.5	-26.1	NP_536425		5' arm      3' arm
12155	+	34131	90	21.5	-20.9	NP_536395		5' arm      3' arm
12257	-	43407	88	21.5	-27.2	NP_536412		5' arm      3' arm
12204	-	5500	89	21.5	-20.5	NP_536362		5' arm      3' arm
12110	+	7580	88	21.5	-23.2	NP_536366		5' arm      3' arm
12224	-	18407	87	21.5	-24.5	NP_536377		5' arm      3' arm
12263	-	47029	89	21.5	-22.5	NP_536417		5' arm      3' arm
12127	+	16600	88	21.5	-20.9	NP_536376		5' arm      3' arm
12190	+	52410	88	21.5	-21.3	NP_536425		5' arm      3' arm
12182	+	47338	90	21.5	-24.9	NP_536417		5' arm      3' arm
12172	+	43023	83	21.5	-23.7	NP_536412		5' arm      3' arm
12209	-	7837	89	21.5	-20.2	NP_536367		5' arm      3' arm
12170	+	42013	88	21.5	-25.3	NP_536410		5' arm      3' arm
12272	-	52588	89	21.5	-31.5	NP_536425		5' arm      3' arm
12217	-	11931	86	21.5	-21	NP_536371		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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