miRNA display CGI


Results 61 - 80 of 179 are showing below:
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GenBank Identifier RefSeq Acc. Name
17975161 NC_003309.1 Bacteriophage phiE125

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
12263 - 47029 89 21.5 -22.5 NP_536417 5' arm      3' arm
12262 - 45591 90 21 -21.9 NP_536414 5' arm      3' arm
12178 + 45713 89 21 -25.1 NP_536415 5' arm      3' arm
12140 + 23934 89 21 -23.1 NP_536384 5' arm      3' arm
12133 + 19031 89 21 -23.4 NP_536377 5' arm      3' arm
12166 + 39412 89 21 -21.9 NP_536404 5' arm      3' arm
12218 - 12160 90 21 -22.9 NP_536371 5' arm      3' arm
12169 + 41450 88 21 -21.9 NP_536409 5' arm      3' arm
12134 + 19274 87 21 -20.4 NP_536377 5' arm      3' arm
12266 - 48268 85 21 -34.8 NP_536418 5' arm      3' arm
12214 - 11110 90 21 -25.4 NP_536371 5' arm      3' arm
12226 - 19804 90 21 -21.2 NP_536377       3' arm
12148 + 27951 90 21 -21.5 NP_536388 5' arm      3' arm
12151 + 32474 88 21 -24.9 NP_536394 5' arm      3' arm
12181 + 46757 86 21 -23.7 5' arm      3' arm
12255 - 40675 85 21 -24.1 NP_536407 5' arm      3' arm
12229 - 20183 89 20.5 -22.5 NP_536377 5' arm      3' arm
12107 + 6981 88 20.5 -20.2 NP_536365 5' arm      3' arm
12149 + 28233 90 20.5 -22.2 NP_536389 5' arm      3' arm
12227 - 19921 89 20.5 -24.4 NP_536377 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.