miRNA display CGI


Results 1 - 20 of 46 are showing below:
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GenBank Identifier RefSeq Acc. Name
20065797 NC_003525.1 Stx2 converting bacteriophage I virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
14666 + 26482 90 23.5 -28.2 NP_817131 5' arm      3' arm
14694 - 57483 89 23.5 -26.3 NP_613032 5' arm      3' arm
14676 + 57371 84 19.5 -22 NP_613032 5' arm      3' arm
14675 + 57023 90 20 -20.8 NP_613031 5' arm      3' arm
14692 - 56234 89 19.5 -21.81 NP_613029 5' arm      3' arm
14674 + 55710 86 22 -25.44 NP_613026 5' arm      3' arm
14693 - 56563 86 20 -26.3 NP_613026 5' arm      3' arm
14673 + 52004 87 22.5 -27.1 NP_613021 5' arm      3' arm
14672 + 48394 89 21.5 -24.7 NP_613010 5' arm      3' arm
14691 - 48281 88 21.5 -20 NP_613010 5' arm      3' arm
14690 - 47045 87 21.5 -22.2 NP_613006 5' arm      3' arm
14689 - 46595 87 20.5 -20.3 NP_613005 5' arm      3' arm
14671 + 46392 85 20 -23.56 NP_613004 5' arm      3' arm
14688 - 45721 88 24.5 -31.1 NP_613002 5' arm      3' arm
14670 + 38764 90 21.5 -20.7 NP_612983 5' arm      3' arm
14686 - 35906 90 20 -21.1 NP_612971 5' arm      3' arm
14668 + 28747 86 24 -29.8 NP_612950 5' arm      3' arm
14664 + 22213 88 23 -24.5 NP_612938 5' arm      3' arm
14683 - 21801 87 21.5 -25 NP_612937 5' arm      3' arm
14682 - 21552 89 19 -20.52 NP_612935 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.