miRNA display CGI


Results 1 - 20 of 79 are showing below:
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GenBank Identifier RefSeq Acc. Name
73852470 NC_007346.1 Emiliania huxleyi virus 86

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
32790 + 257770 90 24 -21.1 5' arm      3' arm
32803 + 275512 88 22.5 -22.4 5' arm      3' arm
32831 - 254319 89 20.5 -26 5' arm      3' arm
32834 - 304857 89 19.5 -20.6 5' arm      3' arm
32802 + 274915 82 24.5 -26.4 5' arm      3' arm
32838 - 334176 83 19.5 -19.5 5' arm      3' arm
32814 - 43524 87 20.5 -19.7 5' arm      3' arm
32792 + 258482 82 20 -21.6 5' arm      3' arm
32788 + 257133 89 19.5 -21.6 5' arm      3' arm
32791 + 257875 82 20 -21.6 5' arm      3' arm
32787 + 257031 90 22.5 -21.1 5' arm      3' arm
32812 - 6447 90 20 -25.1 YP_293763 5' arm      3' arm
32813 - 30732 86 23.5 -19.4 YP_293787 5' arm      3' arm
32815 - 46624 87 20.5 -19.6 YP_293804 5' arm      3' arm
32816 - 48171 87 20.5 -24 YP_293805 5' arm      3' arm
32765 + 50767 87 21 -20.7 YP_293809 5' arm      3' arm
32766 + 77656 88 22.5 -21 YP_293830 5' arm      3' arm
32768 + 86992 88 19 -21 YP_293839 5' arm      3' arm
32767 + 86512 87 20.5 -24.1 YP_293839 5' arm      3' arm
32769 + 87143 89 22.5 -28.4 YP_293839 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.