miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32843	-	401574	87	22.5	-23.6	YP_294219		5' arm      3' arm
32842	-	393464	86	20.5	-22.7	YP_294211		5' arm      3' arm
32811	+	392580	89	20.5	-20.5	YP_294210		5' arm      3' arm
32841	-	385052	89	19.5	-26.5	YP_294202		5' arm      3' arm
32810	+	373357	90	24	-24.8	YP_294192		5' arm      3' arm
32840	-	369163	87	20.5	-26.9	YP_294189		5' arm      3' arm
32809	+	361958	88	19.5	-22.3	YP_294184		5' arm      3' arm
32839	-	343118	90	22.5	-22.9	YP_294164		5' arm      3' arm
32808	+	336674	82	23	-23.1	YP_294156		5' arm      3' arm
32807	+	332602	90	21	-23.7	YP_294150		5' arm      3' arm
32837	-	322954	87	22	-20.4	YP_294142		5' arm      3' arm
32806	+	323373	90	23.5	-22.1	YP_294142		5' arm      3' arm
32835	-	315973	88	23.5	-28	YP_294129		5' arm      3' arm
32836	-	316437	89	22	-24.5	YP_294129		5' arm      3' arm
32804	+	306915	89	20.5	-29.7	YP_294122		5' arm      3' arm
32805	+	309478	88	22	-22.7	YP_294122		5' arm      3' arm
32801	+	274729	89	21	-21.2	YP_294080		5' arm      3' arm
32799	+	274221	90	23	-22.8	YP_294080		5' arm      3' arm
32800	+	274456	89	19.5	-24.8	YP_294080		5' arm      3' arm
32798	+	272829	89	19.5	-20.6	YP_294078		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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