miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32813	-	30732	86	23.5	-19.4	YP_293787		5' arm      3' arm
32789	+	257636	83	21	-19.4	YP_294052		5' arm      3' arm
32838	-	334176	83	19.5	-19.5			5' arm      3' arm
32797	+	270013	90	21.5	-19.6	YP_294072		5' arm      3' arm
32815	-	46624	87	20.5	-19.6	YP_293804		5' arm      3' arm
32774	+	156390	89	19.5	-19.6	YP_293921		5' arm      3' arm
32814	-	43524	87	20.5	-19.7			5' arm      3' arm
32781	+	238454	89	19	-19.8	YP_294020		5' arm      3' arm
32824	-	209791	89	21	-20	YP_293975		5' arm      3' arm
32837	-	322954	87	22	-20.4	YP_294142		5' arm      3' arm
32811	+	392580	89	20.5	-20.5	YP_294210		5' arm      3' arm
32786	+	255968	89	22	-20.5	YP_294050		5' arm      3' arm
32820	-	135831	88	25	-20.5	YP_293899		5' arm      3' arm
32798	+	272829	89	19.5	-20.6	YP_294078		5' arm      3' arm
32834	-	304857	89	19.5	-20.6			5' arm      3' arm
32825	-	211741	87	20.5	-20.7	YP_293977		5' arm      3' arm
32828	-	239221	90	25.5	-20.7	YP_294021		5' arm      3' arm
32765	+	50767	87	21	-20.7	YP_293809		5' arm      3' arm
32778	+	170948	88	20.5	-20.8	YP_293936		5' arm      3' arm
32766	+	77656	88	22.5	-21	YP_293830		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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