miRNA display CGI


Results 1 - 20 of 79 are showing below:
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GenBank Identifier RefSeq Acc. Name
73852470 NC_007346.1 Emiliania huxleyi virus 86

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
32823 - 189388 90 26 -21 YP_293946 5' arm      3' arm
32828 - 239221 90 25.5 -20.7 YP_294021 5' arm      3' arm
32820 - 135831 88 25 -20.5 YP_293899 5' arm      3' arm
32829 - 239361 90 25 -24.8 YP_294021 5' arm      3' arm
32771 + 109517 89 25 -29.1 YP_293865 5' arm      3' arm
32802 + 274915 82 24.5 -26.4 5' arm      3' arm
32790 + 257770 90 24 -21.1 5' arm      3' arm
32810 + 373357 90 24 -24.8 YP_294192 5' arm      3' arm
32817 - 91240 89 23.5 -24 YP_293843 5' arm      3' arm
32813 - 30732 86 23.5 -19.4 YP_293787 5' arm      3' arm
32833 - 260636 90 23.5 -23.6 YP_294056 5' arm      3' arm
32806 + 323373 90 23.5 -22.1 YP_294142 5' arm      3' arm
32827 - 238780 87 23.5 -24.7 YP_294020 5' arm      3' arm
32835 - 315973 88 23.5 -28 YP_294129 5' arm      3' arm
32799 + 274221 90 23 -22.8 YP_294080 5' arm      3' arm
32808 + 336674 82 23 -23.1 YP_294156 5' arm      3' arm
32769 + 87143 89 22.5 -28.4 YP_293839 5' arm      3' arm
32843 - 401574 87 22.5 -23.6 YP_294219 5' arm      3' arm
32787 + 257031 90 22.5 -21.1 5' arm      3' arm
32839 - 343118 90 22.5 -22.9 YP_294164 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.