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| GenBank Identifier | RefSeq Acc. | Name |
| 73852470 | NC_007346.1 | Emiliania huxleyi virus 86 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 32800 | + | 274456 | 89 | 19.5 | -24.8 | YP_294080 | 5' arm 3' arm | ||
| 32810 | + | 373357 | 90 | 24 | -24.8 | YP_294192 | 5' arm 3' arm | ||
| 32796 | + | 266124 | 90 | 19 | -24.7 | YP_294064 | 5' arm 3' arm | ||
| 32827 | - | 238780 | 87 | 23.5 | -24.7 | YP_294020 | 5' arm 3' arm | ||
| 32830 | - | 239606 | 82 | 20 | -24.6 | YP_294021 | 5' arm 3' arm | ||
| 32836 | - | 316437 | 89 | 22 | -24.5 | YP_294129 | 5' arm 3' arm | ||
| 32767 | + | 86512 | 87 | 20.5 | -24.1 | YP_293839 | 5' arm 3' arm | ||
| 32816 | - | 48171 | 87 | 20.5 | -24 | YP_293805 | 5' arm 3' arm | ||
| 32780 | + | 217093 | 89 | 21 | -24 | YP_293981 | 5' arm 3' arm | ||
| 32817 | - | 91240 | 89 | 23.5 | -24 | YP_293843 | 5' arm 3' arm | ||
| 32785 | + | 255862 | 89 | 21.5 | -23.8 | YP_294050 | 5' arm 3' arm | ||
| 32807 | + | 332602 | 90 | 21 | -23.7 | YP_294150 | 5' arm 3' arm | ||
| 32821 | - | 157466 | 89 | 19.5 | -23.7 | YP_293922 | 5' arm 3' arm | ||
| 32843 | - | 401574 | 87 | 22.5 | -23.6 | YP_294219 | 5' arm 3' arm | ||
| 32833 | - | 260636 | 90 | 23.5 | -23.6 | YP_294056 | 5' arm 3' arm | ||
| 32770 | + | 103209 | 90 | 21.5 | -23.5 | YP_293859 | 5' arm 3' arm | ||
| 32832 | - | 255572 | 86 | 21 | -23.4 | YP_294050 | 5' arm 3' arm | ||
| 32808 | + | 336674 | 82 | 23 | -23.1 | YP_294156 | 5' arm 3' arm | ||
| 32839 | - | 343118 | 90 | 22.5 | -22.9 | YP_294164 | 5' arm 3' arm | ||
| 32783 | + | 238899 | 88 | 20 | -22.9 | YP_294020 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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