miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32799	+	274221	90	23	-22.8	YP_294080		5' arm      3' arm
32805	+	309478	88	22	-22.7	YP_294122		5' arm      3' arm
32842	-	393464	86	20.5	-22.7	YP_294211		5' arm      3' arm
32803	+	275512	88	22.5	-22.4			5' arm      3' arm
32809	+	361958	88	19.5	-22.3	YP_294184		5' arm      3' arm
32795	+	263439	87	20.5	-22.1	YP_294060		5' arm      3' arm
32777	+	165730	88	19	-22.1	YP_293929		5' arm      3' arm
32806	+	323373	90	23.5	-22.1	YP_294142		5' arm      3' arm
32791	+	257875	82	20	-21.6			5' arm      3' arm
32788	+	257133	89	19.5	-21.6			5' arm      3' arm
32792	+	258482	82	20	-21.6			5' arm      3' arm
32793	+	260550	85	22	-21.5	YP_294056		5' arm      3' arm
32794	+	261356	90	20	-21.22	YP_294057		5' arm      3' arm
32801	+	274729	89	21	-21.2	YP_294080		5' arm      3' arm
32775	+	160297	89	19.5	-21.2	YP_293925		5' arm      3' arm
32790	+	257770	90	24	-21.1			5' arm      3' arm
32787	+	257031	90	22.5	-21.1			5' arm      3' arm
32768	+	86992	88	19	-21	YP_293839		5' arm      3' arm
32766	+	77656	88	22.5	-21	YP_293830		5' arm      3' arm
32823	-	189388	90	26	-21	YP_293946		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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