miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32770	+	103209	90	21.5	-23.5	YP_293859		5' arm      3' arm
32768	+	86992	88	19	-21	YP_293839		5' arm      3' arm
32767	+	86512	87	20.5	-24.1	YP_293839		5' arm      3' arm
32769	+	87143	89	22.5	-28.4	YP_293839		5' arm      3' arm
32766	+	77656	88	22.5	-21	YP_293830		5' arm      3' arm
32779	+	171085	90	19.5	-28	YP_293936		5' arm      3' arm
32780	+	217093	89	21	-24	YP_293981		5' arm      3' arm
32794	+	261356	90	20	-21.22	YP_294057		5' arm      3' arm
32792	+	258482	82	20	-21.6			5' arm      3' arm
32791	+	257875	82	20	-21.6			5' arm      3' arm
32789	+	257636	83	21	-19.4	YP_294052		5' arm      3' arm
32793	+	260550	85	22	-21.5	YP_294056		5' arm      3' arm
32787	+	257031	90	22.5	-21.1			5' arm      3' arm
32790	+	257770	90	24	-21.1			5' arm      3' arm
32785	+	255862	89	21.5	-23.8	YP_294050		5' arm      3' arm
32786	+	255968	89	22	-20.5	YP_294050		5' arm      3' arm
32784	+	239492	88	20.5	-27.3	YP_294021		5' arm      3' arm
32781	+	238454	89	19	-19.8	YP_294020		5' arm      3' arm
32783	+	238899	88	20	-22.9	YP_294020		5' arm      3' arm
32782	+	238704	90	21	-25.5	YP_294020		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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