miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32824	-	209791	89	21	-20	YP_293975		5' arm      3' arm
32816	-	48171	87	20.5	-24	YP_293805		5' arm      3' arm
32826	-	231006	88	22	-27.6	YP_294005		5' arm      3' arm
32841	-	385052	89	19.5	-26.5	YP_294202		5' arm      3' arm
32817	-	91240	89	23.5	-24	YP_293843		5' arm      3' arm
32820	-	135831	88	25	-20.5	YP_293899		5' arm      3' arm
32815	-	46624	87	20.5	-19.6	YP_293804		5' arm      3' arm
32812	-	6447	90	20	-25.1	YP_293763		5' arm      3' arm
32842	-	393464	86	20.5	-22.7	YP_294211		5' arm      3' arm
32843	-	401574	87	22.5	-23.6	YP_294219		5' arm      3' arm
32839	-	343118	90	22.5	-22.9	YP_294164		5' arm      3' arm
32840	-	369163	87	20.5	-26.9	YP_294189		5' arm      3' arm
32771	+	109517	89	25	-29.1	YP_293865		5' arm      3' arm
32788	+	257133	89	19.5	-21.6			5' arm      3' arm
32794	+	261356	90	20	-21.22	YP_294057		5' arm      3' arm
32792	+	258482	82	20	-21.6			5' arm      3' arm
32791	+	257875	82	20	-21.6			5' arm      3' arm
32789	+	257636	83	21	-19.4	YP_294052		5' arm      3' arm
32778	+	170948	88	20.5	-20.8	YP_293936		5' arm      3' arm
32779	+	171085	90	19.5	-28	YP_293936		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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