miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
17596	+	6429	90	24.5	-20.2			5' arm      3' arm
17590	+	1948	90	19	-23.3	NP_775257		5' arm      3' arm
17592	+	3575	86	20	-23.3	NP_775255		5' arm      3' arm
17589	+	984	85	21	-25.9			5' arm      3' arm
17588	+	562	87	22.5	-26			5' arm      3' arm
17602	+	14134	90	25	-21.9	NP_775242		5' arm      3' arm
17608	+	17311	90	23	-28.8	NP_775239		5' arm      3' arm
17616	+	27435	86	23.5	-22.7	NP_775225		5' arm      3' arm
17615	+	27133	90	19.5	-22.9	NP_775225		5' arm      3' arm
17614	+	23276	89	21	-21.6	NP_775230		5' arm      3' arm
17612	+	19958	88	19	-22.7	NP_775238		5' arm      3' arm
17611	+	19343	86	19	-21	NP_775239		5' arm      3' arm
17613	+	20826	89	19.5	-30.3			5' arm      3' arm
17607	+	16980	83	19	-20.4	NP_775239		5' arm      3' arm
17603	+	14855	90	19	-27.8	NP_775240		5' arm      3' arm
17610	+	17708	88	21.5	-21.1	NP_775239		5' arm      3' arm
17609	+	17506	81	21.5	-24.4	NP_775239		5' arm      3' arm
17604	+	15112	90	21.5	-23.8	NP_775240		5' arm      3' arm
17606	+	16878	87	22	-20.6	NP_775239		5' arm      3' arm
17605	+	15460	90	22.5	-22.7	NP_775240		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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