miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
17604	+	15112	90	21.5	-23.8	NP_775240		5' arm      3' arm
17606	+	16878	87	22	-20.6	NP_775239		5' arm      3' arm
17605	+	15460	90	22.5	-22.7	NP_775240		5' arm      3' arm
17608	+	17311	90	23	-28.8	NP_775239		5' arm      3' arm
17602	+	14134	90	25	-21.9	NP_775242		5' arm      3' arm
17600	+	11253	80	19	-24.4	NP_775245		5' arm      3' arm
17601	+	13627	89	22	-20.7	NP_775242		5' arm      3' arm
17658	-	39683	89	19.5	-34.9			5' arm      3' arm
17655	-	35257	89	21	-24.7	NP_775211		5' arm      3' arm
17651	-	32824	90	21	-22.4	NP_775214		5' arm      3' arm
17652	-	33147	89	20.5	-27	NP_775214		5' arm      3' arm
17654	-	34774	90	20	-22.1	NP_775212		5' arm      3' arm
17657	-	38183	90	20.5	-19.9	NP_775208		5' arm      3' arm
17659	-	40959	86	19	-26	NP_775203		5' arm      3' arm
17664	-	43944	88	19	-24.1	NP_775192		5' arm      3' arm
17663	-	43246	89	19.5	-20.9	NP_775194		5' arm      3' arm
17662	-	43052	89	20	-29.6	NP_775195		5' arm      3' arm
17665	-	44598	89	21.5	-32	NP_775189		5' arm      3' arm
17661	-	42737	90	22	-26.29	NP_955000		5' arm      3' arm
17636	-	1092	90	20	-28.7			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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