miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
14282	+	232479	89	27.5	-37.3			5' arm      3' arm
14387	-	60854	89	21.5	-36.3	NP_612690		5' arm      3' arm
14308	-	10504	90	19	-35.9			5' arm      3' arm
14195	+	166754	88	26	-35.1	NP_612739		5' arm      3' arm
14514	-	146386	86	21.5	-35	NP_612730		5' arm      3' arm
14059	+	90369	90	21.5	-34.92			5' arm      3' arm
14589	-	211869	86	22	-34.5	NP_612784		5' arm      3' arm
14235	+	195097	89	20	-34.1	NP_612769		5' arm      3' arm
14464	-	112810	90	23	-33.9	NP_612710		5' arm      3' arm
14340	-	33765	84	20	-33.3	NP_612672		5' arm      3' arm
14520	-	152469	89	20	-33.3	NP_612735		5' arm      3' arm
14629	-	227356	89	25.5	-33.2			5' arm      3' arm
13997	+	47314	90	28.5	-33.2			5' arm      3' arm
14269	+	222892	86	22	-33.1	NP_612795		5' arm      3' arm
14197	+	167698	89	25.5	-32.9	NP_612740		5' arm      3' arm
14378	-	56756	89	23.5	-32.5	NP_612688		5' arm      3' arm
14272	+	223627	89	23.5	-32.4			5' arm      3' arm
14210	+	174182	87	21	-32.3	NP_612746		5' arm      3' arm
14035	+	77034	88	21	-32.2	NP_612698		5' arm      3' arm
14058	+	88751	90	22	-32.2	NP_612701		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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