miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13935	+	5516	89	20.5	-28.6			5' arm      3' arm
13938	+	6377	90	21	-28.1			5' arm      3' arm
13936	+	5788	89	21.5	-31.3			5' arm      3' arm
13939	+	6488	89	23.5	-20.7			5' arm      3' arm
13937	+	6009	90	24	-20.8			5' arm      3' arm
13949	+	17509	90	20.5	-24.2	NP_612657		5' arm      3' arm
13948	+	16763	88	20	-22.6	NP_612657		5' arm      3' arm
13962	+	30116	89	23	-21.3	NP_612670		5' arm      3' arm
13968	+	31633	90	23.5	-21.2	NP_612671		5' arm      3' arm
13967	+	31389	90	24	-24.61	NP_612671		5' arm      3' arm
13956	+	25574	90	19.5	-21.7	NP_612667		5' arm      3' arm
13959	+	27340	90	20.5	-26.2	NP_612668		5' arm      3' arm
13958	+	27193	87	20.5	-20.6	NP_612668		5' arm      3' arm
13957	+	25906	90	20.5	-24.1	NP_612667		5' arm      3' arm
13953	+	23582	84	20.5	-20	NP_612664		5' arm      3' arm
13954	+	24300	86	21	-21	NP_612665		5' arm      3' arm
13955	+	25309	90	28	-23.9			5' arm      3' arm
13951	+	19264	88	19.5	-22.4	NP_612658		5' arm      3' arm
13952	+	19925	90	20	-23.9	NP_612659		5' arm      3' arm
13950	+	19175	89	20.5	-23.3	NP_612658		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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