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| GenBank Identifier | RefSeq Acc. | Name |
| 9628835 | NC_001720.1 | Fowl adenovirus A |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 4339 | + | 19966 | 89 | 19.5 | -30.1 | NP_043886 | 5' arm 3' arm | ||
| 4340 | + | 20217 | 87 | 20.5 | -20.6 | NP_043886 | 5' arm 3' arm | ||
| 4341 | + | 20876 | 90 | 20.5 | -25.8 | NP_043886 | 5' arm 3' arm | ||
| 4342 | + | 21485 | 87 | 19 | -19.7 | NP_043887 | 5' arm 3' arm | ||
| 4343 | + | 22080 | 89 | 20 | -26.9 | NP_043888 | 5' arm 3' arm | ||
| 4344 | + | 22435 | 77 | 20 | -23.2 | NP_043888 | 5' arm 3' arm | ||
| 4345 | + | 23031 | 89 | 22 | -23.3 | NP_043888 | 5' arm 3' arm | ||
| 4346 | + | 23251 | 82 | 19 | -22 | 5' arm 3' arm | |||
| 4347 | + | 24164 | 88 | 20.5 | -21.6 | NP_043889 | 5' arm 3' arm | ||
| 4348 | + | 29914 | 81 | 19 | -25 | NP_043891 | 5' arm 3' arm | ||
| 4349 | + | 30913 | 89 | 19 | -19.4 | NP_043892 | 5' arm 3' arm | ||
| 4350 | + | 34005 | 90 | 19.5 | -21.1 | 5' arm 3' arm | |||
| 4351 | + | 37746 | 87 | 20 | -27.1 | NP_043901 | 5' arm 3' arm | ||
| 4352 | + | 38539 | 79 | 21 | -22.8 | 5' arm 3' arm | |||
| 4353 | + | 43438 | 90 | 20 | -23.2 | 5' arm 3' arm | |||
| 4354 | - | 5090 | 90 | 24.5 | -24.9 | NP_043875 | 5' arm 3' arm | ||
| 4355 | - | 7236 | 86 | 19 | -19.5 | NP_043878 | 5' arm 3' arm | ||
| 4356 | - | 9593 | 89 | 19.5 | -21 | NP_043878 | 5' arm 3' arm | ||
| 4357 | - | 12313 | 89 | 21.5 | -20.9 | NP_043880 | 5' arm 3' arm | ||
| 4358 | - | 14790 | 90 | 19 | -26.4 | NP_043881 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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