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| GenBank Identifier | RefSeq Acc. | Name |
| 9628835 | NC_001720.1 | Fowl adenovirus A |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 4344 | + | 22435 | 77 | 20 | -23.2 | NP_043888 | 5' arm 3' arm | ||
| 4343 | + | 22080 | 89 | 20 | -26.9 | NP_043888 | 5' arm 3' arm | ||
| 4334 | + | 12054 | 86 | 20 | -25.2 | 5' arm 3' arm | |||
| 4332 | + | 11472 | 88 | 20 | -21 | NP_043879 | 5' arm 3' arm | ||
| 4370 | - | 25116 | 89 | 20 | -23.3 | NP_043889 | 5' arm 3' arm | ||
| 4365 | - | 20792 | 89 | 20 | -32.4 | NP_043886 | 5' arm 3' arm | ||
| 4371 | - | 25205 | 87 | 20 | -20.8 | NP_043889 | 5' arm 3' arm | ||
| 4341 | + | 20876 | 90 | 20.5 | -25.8 | NP_043886 | 5' arm 3' arm | ||
| 4382 | - | 30839 | 90 | 20.5 | -20.9 | NP_043892 | 5' arm 3' arm | ||
| 4366 | - | 20965 | 90 | 20.5 | -25.2 | NP_043886 | 5' arm 3' arm | ||
| 4324 | + | 4146 | 85 | 20.5 | -22.4 | NP_043873 | 5' arm 3' arm | ||
| 4372 | - | 25941 | 90 | 20.5 | -22.7 | NP_043889 | 5' arm 3' arm | ||
| 4362 | - | 19873 | 88 | 20.5 | -23.1 | NP_043886 | 5' arm 3' arm | ||
| 4379 | - | 28728 | 87 | 20.5 | -19.5 | NP_043891 | 5' arm 3' arm | ||
| 4333 | + | 11926 | 90 | 20.5 | -20.3 | NP_043879 | 5' arm 3' arm | ||
| 4347 | + | 24164 | 88 | 20.5 | -21.6 | NP_043889 | 5' arm 3' arm | ||
| 4335 | + | 13277 | 90 | 20.5 | -25.8 | NP_043880 | 5' arm 3' arm | ||
| 4340 | + | 20217 | 87 | 20.5 | -20.6 | NP_043886 | 5' arm 3' arm | ||
| 4381 | - | 29519 | 87 | 20.5 | -21.4 | NP_043891 | 5' arm 3' arm | ||
| 4326 | + | 6401 | 89 | 21 | -23.3 | NP_043876 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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