miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
15389	+	935	88	20	-29.2			5' arm      3' arm
15390	+	1847	90	20.5	-23.4	NP_640263		5' arm      3' arm
15391	+	5513	88	21	-30.6	NP_640273		5' arm      3' arm
15392	+	6025	81	21.5	-22.8	NP_640274		5' arm      3' arm
15393	+	6640	89	27.5	-35.5	NP_640276		5' arm      3' arm
15394	+	13774	90	20.5	-20.3	NP_640286		5' arm      3' arm
15395	+	19220	89	19.5	-20.5	NP_640297		5' arm      3' arm
15396	+	21114	86	25	-25.4	NP_640302		5' arm      3' arm
15397	+	21970	90	20	-24.8			5' arm      3' arm
15398	+	28995	89	19	-27.7	NP_640308		5' arm      3' arm
15399	+	29309	85	21	-19.5	NP_640308		5' arm      3' arm
15400	+	34760	90	19.5	-26.9	NP_640315		5' arm      3' arm
15401	+	35258	89	21.5	-25.8	NP_640315		5' arm      3' arm
15402	+	38495	75	19.5	-23.9	NP_640319		5' arm      3' arm
15403	+	43810	90	22.5	-20.6	NP_640325		5' arm      3' arm
15404	-	1936	90	23.5	-20.5	NP_640263		5' arm      3' arm
15405	-	2630	83	20.5	-19.4	NP_640267		5' arm      3' arm
15406	-	3273	90	22	-22	NP_640268		5' arm      3' arm
15407	-	3520	89	20.5	-19.8	NP_640269		5' arm      3' arm
15408	-	3917	89	20	-19.9			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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