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| GenBank Identifier | RefSeq Acc. | Name |
| 32170834 | NC_004913.1 | Stx1 converting bacteriophage virion |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 21942 | - | 25020 | 90 | 23 | -19.6 | NP_859129 | 5' arm 3' arm | ||
| 21920 | + | 26185 | 86 | 20.5 | -31.6 | NP_859129 | 5' arm 3' arm | ||
| 21939 | - | 20458 | 88 | 23 | -30.7 | NP_859129 | 5' arm 3' arm | ||
| 21915 | + | 19373 | 90 | 20.5 | -20.4 | NP_859129 | 5' arm 3' arm | ||
| 21917 | + | 21101 | 82 | 19 | -20.8 | NP_859134 | 5' arm 3' arm | ||
| 21940 | - | 21453 | 89 | 19 | -20.52 | NP_859136 | 5' arm 3' arm | ||
| 21941 | - | 21702 | 87 | 21.5 | -25 | NP_859136 | 5' arm 3' arm | ||
| 21919 | + | 22114 | 88 | 23 | -24.5 | NP_859138 | 5' arm 3' arm | ||
| 21921 | + | 26383 | 90 | 23.5 | -28.2 | NP_859146 | 5' arm 3' arm | ||
| 21923 | + | 28648 | 86 | 24 | -29.8 | NP_859151 | 5' arm 3' arm | ||
| 21944 | - | 36046 | 90 | 20 | -21.1 | NP_859173 | 5' arm 3' arm | ||
| 21945 | - | 37708 | 88 | 19 | -19.8 | NP_859181 | 5' arm 3' arm | ||
| 21946 | - | 39350 | 89 | 20 | -22.9 | NP_859189 | 5' arm 3' arm | ||
| 21947 | - | 41129 | 87 | 23 | -26.2 | NP_859195 | 5' arm 3' arm | ||
| 21925 | + | 41042 | 89 | 25.5 | -27.4 | NP_859195 | 5' arm 3' arm | ||
| 21926 | + | 41751 | 87 | 21.5 | -25.9 | NP_859197 | 5' arm 3' arm | ||
| 21927 | + | 45838 | 89 | 21.5 | -26.6 | NP_859206 | 5' arm 3' arm | ||
| 21948 | - | 46259 | 90 | 20 | -20.5 | NP_859206 | 5' arm 3' arm | ||
| 21928 | + | 48149 | 89 | 21.5 | -24.7 | NP_859211 | 5' arm 3' arm | ||
| 21949 | - | 48036 | 88 | 21.5 | -20 | NP_859211 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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