miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21904	+	3425	89	23	-29.7			5' arm      3' arm
21943	-	31708	89	23.5	-27.6			5' arm      3' arm
21924	+	31350	90	24	-23.8			5' arm      3' arm
21905	+	4249	88	23	-24	NP_859085		5' arm      3' arm
21906	+	6797	89	23	-24.2	NP_859094		5' arm      3' arm
21907	+	7415	89	22.5	-22.3	NP_859096		5' arm      3' arm
21937	-	9143	88	19.5	-21	NP_859099		5' arm      3' arm
21908	+	8146	87	22	-26	NP_859099		5' arm      3' arm
21936	-	8772	90	19	-21.5	NP_859099		5' arm      3' arm
21935	-	8485	90	21	-21	NP_859099		5' arm      3' arm
21938	-	11552	89	23.5	-29.31	NP_859109		5' arm      3' arm
21909	+	10981	89	20.5	-21.2	NP_859110		5' arm      3' arm
21911	+	12878	90	19.5	-21.5	NP_859112		5' arm      3' arm
21910	+	12513	90	21	-20.6	NP_859112		5' arm      3' arm
21912	+	15483	87	19	-34.4	NP_859118		5' arm      3' arm
21913	+	16804	89	20	-23.4	NP_859121		5' arm      3' arm
21914	+	17594	84	23.5	-23.6	NP_859126		5' arm      3' arm
21918	+	21271	88	19.5	-21.3	NP_859129		5' arm      3' arm
21916	+	19994	82	20	-22	NP_859129		5' arm      3' arm
21939	-	20458	88	23	-30.7	NP_859129		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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