miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21932	+	55470	86	19	-37.2	NP_859231		5' arm      3' arm
21912	+	15483	87	19	-34.4	NP_859118		5' arm      3' arm
21920	+	26185	86	20.5	-31.6	NP_859129		5' arm      3' arm
21939	-	20458	88	23	-30.7	NP_859129		5' arm      3' arm
21923	+	28648	86	24	-29.8	NP_859151		5' arm      3' arm
21904	+	3425	89	23	-29.7			5' arm      3' arm
21938	-	11552	89	23.5	-29.31	NP_859109		5' arm      3' arm
21921	+	26383	90	23.5	-28.2	NP_859146		5' arm      3' arm
21943	-	31708	89	23.5	-27.6			5' arm      3' arm
21925	+	41042	89	25.5	-27.4	NP_859195		5' arm      3' arm
21927	+	45838	89	21.5	-26.6	NP_859206		5' arm      3' arm
21952	-	54694	86	20	-26.3	NP_859224		5' arm      3' arm
21947	-	41129	87	23	-26.2	NP_859195		5' arm      3' arm
21908	+	8146	87	22	-26	NP_859099		5' arm      3' arm
21926	+	41751	87	21.5	-25.9	NP_859197		5' arm      3' arm
21929	+	50393	87	21.5	-25.5	NP_859219		5' arm      3' arm
21941	-	21702	87	21.5	-25	NP_859136		5' arm      3' arm
21934	+	56025	86	21.5	-24.9	NP_859235		5' arm      3' arm
21928	+	48149	89	21.5	-24.7	NP_859211		5' arm      3' arm
21919	+	22114	88	23	-24.5	NP_859138		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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