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| GenBank Identifier | RefSeq Acc. | Name |
| 32170834 | NC_004913.1 | Stx1 converting bacteriophage virion |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 21942 | - | 25020 | 90 | 23 | -19.6 | NP_859129 | 5' arm 3' arm | ||
| 21922 | + | 26602 | 89 | 28.5 | -19.6 | NP_859129 | 5' arm 3' arm | ||
| 21945 | - | 37708 | 88 | 19 | -19.8 | NP_859181 | 5' arm 3' arm | ||
| 21949 | - | 48036 | 88 | 21.5 | -20 | NP_859211 | 5' arm 3' arm | ||
| 21930 | + | 52679 | 87 | 19 | -20.4 | NP_859223 | 5' arm 3' arm | ||
| 21915 | + | 19373 | 90 | 20.5 | -20.4 | NP_859129 | 5' arm 3' arm | ||
| 21948 | - | 46259 | 90 | 20 | -20.5 | NP_859206 | 5' arm 3' arm | ||
| 21940 | - | 21453 | 89 | 19 | -20.52 | NP_859136 | 5' arm 3' arm | ||
| 21910 | + | 12513 | 90 | 21 | -20.6 | NP_859112 | 5' arm 3' arm | ||
| 21931 | + | 55157 | 90 | 20 | -20.8 | NP_859230 | 5' arm 3' arm | ||
| 21917 | + | 21101 | 82 | 19 | -20.8 | NP_859134 | 5' arm 3' arm | ||
| 21935 | - | 8485 | 90 | 21 | -21 | NP_859099 | 5' arm 3' arm | ||
| 21937 | - | 9143 | 88 | 19.5 | -21 | NP_859099 | 5' arm 3' arm | ||
| 21944 | - | 36046 | 90 | 20 | -21.1 | NP_859173 | 5' arm 3' arm | ||
| 21909 | + | 10981 | 89 | 20.5 | -21.2 | NP_859110 | 5' arm 3' arm | ||
| 21918 | + | 21271 | 88 | 19.5 | -21.3 | NP_859129 | 5' arm 3' arm | ||
| 21911 | + | 12878 | 90 | 19.5 | -21.5 | NP_859112 | 5' arm 3' arm | ||
| 21936 | - | 8772 | 90 | 19 | -21.5 | NP_859099 | 5' arm 3' arm | ||
| 21951 | - | 54365 | 89 | 19.5 | -21.81 | NP_859224 | 5' arm 3' arm | ||
| 21933 | + | 55869 | 85 | 21.5 | -21.9 | NP_859233 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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