miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21769	-	26231	90	20.5	-24.1	NP_851986		5' arm      3' arm
21739	+	24446	89	21.5	-24.3	NP_851984		5' arm      3' arm
21738	+	23749	87	20.5	-22.7	NP_851982		5' arm      3' arm
21768	-	23621	89	23.5	-26.3	NP_851981		5' arm      3' arm
21737	+	23507	88	20	-22	NP_851981		5' arm      3' arm
21767	-	22700	86	20	-26.3	NP_851979		5' arm      3' arm
21766	-	22371	89	19.5	-21.81	NP_851979		5' arm      3' arm
21735	+	18409	89	20	-19.6	NP_851976		5' arm      3' arm
21734	+	14809	89	21.5	-24.7	NP_851969		5' arm      3' arm
21764	-	14696	88	21.5	-20	NP_851969		5' arm      3' arm
21763	-	13460	87	21.5	-22.2	NP_851965		5' arm      3' arm
21762	-	13010	87	20.5	-20.3	NP_851964		5' arm      3' arm
21733	+	12807	85	20	-23.56	NP_851964		5' arm      3' arm
21761	-	12136	88	24.5	-31.1	NP_851963		5' arm      3' arm
21751	+	41057	90	23.5	-19.5			5' arm      3' arm
21748	+	38495	87	20	-21.1			5' arm      3' arm
21747	+	37915	87	21	-23.9			5' arm      3' arm
21745	+	35348	90	21	-19.9			5' arm      3' arm
21744	+	34313	84	21.5	-22.7			5' arm      3' arm
21743	+	31022	81	21	-20.9			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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